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Drugs and Chemicals
External Link
RxNav-in-a-Box provides users with a locally-installable RxNav (https://rxnav.nlm.nih.gov/RxNavDoc.html) and RESTful companion APIs, including RxNorm, RxTerms, RxClass, RxCUI history, and drug-drug interactions.
Tags drugs health data standards software supplements terminologies
Updated
September 30 2022
Views
74

Drugs and Chemicals
External Link
RxNorm provides normalized names for clinical drugs and links its names to many of the drug vocabularies commonly used in pharmacy management and drug interaction software, including those of First Databank, Micromedex, Gold Standard, and Multum. By providing links between these vocabularies, RxNorm can mediate messages between systems not using the same software and vocabulary.
Tags api dataset drugs generic health data standards and 2 more
Updated
September 30 2022
Views
97

Terminology
External Link
RxTerms is a drug interface terminology derived from RxNorm for prescription writing or medication history recording (e.g. in e-prescribing systems, PHRs). RxTerms is derived only from the non-proprietary content of RxNorm, which is developed and maintained by the U.S. National Library of Medicine. No fee or license is required to use the RxTerms data. Technical documentation at https://wwwcf.nlm.nih.gov/umlslicense/rxtermApp/rxTermFileStructure.cfm
Tags api dataset drugs drug terminology health data standards and 1 more
Updated
September 30 2022
Views
75

Research
External Link
The SKR Project was initiated at NLM in order to develop programs to provide usable semantic representation of biomedical free text by building on resources currently available at the library. The SKR project is concerned with reliable and effective management of the information encoded in natural language texts. The project develops programs that provide usable semantic representation of biomedical text by building on resources currently available at the Library, especially the UMLS knowledge sources and the natural language processing tools provided by the SPECIALIST system. This Java-based API to the Semantic Knowledge Representation (SKR) Scheduler facility was created to provide users with the ability to programmatically submit jobs to the Scheduler Batch and Interactive facilities instead of using the Web-based interface.
Tags api medical informatics terminologies tools & utilities
Updated
September 30 2022
Views
63

Molecular biology/Genetics
External Link
The Sequence Read Archive (SRA) stores sequencing data from the next generation of sequencing platforms including Roche 454 GS System®, Illumina Genome Analyzer®, Life Technologies AB SOLiD System®, Helicos Biosciences Heliscope®, Complete Genomics®, and Pacific Biosciences SMRT®.
Tags genetics genomics tools & utilities
Updated
September 30 2022
Views
37

Molecular biology/Genetics
External Link
This site is for browsing WGS (Whole Genome Shotgun) genomes, TSA (Transcriptome Shotgun Assemblies) and TLS (Targeted Locus Study) sets. WGS sequences are incomplete genomes that have been sequenced by a whole genome shotgun strategy. TSA sequences are transcript sequences that have been computationally assembled from primary RNA sequence data. TLS sequences are large-scale marker gene sequencing studies.
Please consult WGS Submission or TSA Submission pages for more details.
https://www.ncbi.nlm.nih.gov/genbank/wgs
https://www.ncbi.nlm.nih.gov/genbank/tsa
Tags genomics tools & utilities
Updated
September 30 2022
Views
35

Terminology
External Link
SNOMED CT is one of a suite of designated standards for use in U.S. Federal Government systems for the electronic exchange of clinical health information and is also a required standard in interoperability specifications of the U.S. Healthcare Information Technology Standards Panel.
Tags dataset health data standards terminologies
Updated
September 30 2022
Views
56

Molecular biology/Genetics
External Link
This genetic variation services interconvert and transform short genetic variants between HGVS expressions, VCF format, and the new SPDI (Sequence Position Deletion Insertion) format, based on alignment datasets used by ClinVar and dbSNP. NOTE: This service is still in beta testing mode
Tags api data specifications genetics genomics molecular biology and 1 more
Updated
September 30 2022
Views
62

Molecular biology/Genetics
External Link
Compute cDNA-to-Genomic sequence alignments.
Tags computational biology genomics software tools & utilities
Updated
September 30 2022
Views
56

Molecular biology/Genetics
External Link
Three dimensional structures provide a wealth of information on the biological function and the evolutionary history of macromolecules. They can be used to examine sequence-structure-function relationships, interactions, active sites, and more.
Tags computational biology dataset macromolecules protein tools & utilities
Updated
September 30 2022
Views
29