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Literature
External Link
An online edition of XML-encoded speeches, articles, and Congressional Appropriations testimonies by former NLM director Martin M. Cummings, based on the collection of his papers in HMD’s Modern Manuscripts collection.
Tags history of medicine reference
Updated
July 19 2024
Views
8,269

Terminology
External Link
MedGen is NCBI's portal to information about conditions and phenotypes related to Medical Genetics. Terms from the NIH Genetic Testing Registry (GTR), UMLS, HPO, Orphanet, ClinVar and other sources are aggregated into concepts, each of which is assigned a unique identifier and a preferred name and symbol. The core content of the record may include names, identifiers used by other databases, mode of inheritance, clinical features, and map location of the loci affecting the disorder. The concept identifier (CUI) is used to aggregate information about that concept, similar to the way NCBI Gene serves as a gateway to gene-related information.
MedGen provides links to such resources as: Genetic tests registered in the NIH Genetic Testing Registry (GTR), GeneReviews, ClinVar, OMIM, Related genes, Disorders with similar clinical features, Medical and research literature, Practice guidelines, Consumer resources, Ontologies such as HPO and ORDO.
Links to the GTR, GeneReviews, and Practice Guidelines are based on curation by NCBI staff. Other data feeds are automated, but reviewed by NCBI staff and informed by feedback from the community.
Tags dataset genetics genomics
Updated
July 19 2024
Views
7,223

Terminology
External Link
Medical Subject Headings (MeSH) is a hierarchically-organized terminology for indexing and cataloging of biomedical information. It is used for the indexing of PubMed and other NLM databases. Please see the Terms and Conditions for more information regarding the use and re-use of MeSH. NLM produces Medical Subject Headings XML, ASCII, MARC 21 and RDF formats.
Updates to the data files are made according to the following schedule:
MeSH XML
MeSH Descriptor files updated annually
MeSH Qualifier files updated annually
MeSH Supplemental Concept Records (SCR) updated daily (Monday - Friday)
MeSH ASCII
MeSH Descriptor files updated annually
MeSH Qualifier files updated annually
MeSH Supplemental Concept Records (SCR) updated daily (Monday - Friday)
MeSH MARC21
All files posted monthly
MeSH RDF
All files posted daily (Monday - Friday)
Tags api dataset health data standards terminologies
Updated
July 19 2024
Views
7,320

Terminology
External Link
A system for producing indexing recommendations to assist in the indexing process at NLM. Currently provides indexing recommendations to more than 100 journals based on the NLM Medical Subject Headings (MeSH) vocabulary.
MTI is the main product of the Indexing Initiative project and has been providing indexing recommendations based on the Medical Subject Headings (MeSH®) vocabulary since 2002. In 2011, NLM expanded MTI's role by designating it as the first-line indexer (MTIFL) for a few journals; today the MTIFL workflow includes over 350 journals and continues to increase. The close collaboration of the NLM Index Section, Lister Hill National Center for Biomedical Communications, and Office of Computer & Communications Systems continues to expand and refine the ability of MTI to provide assistance to the indexers.
Tags api history of medicine medical informatics terminologies tools & utilities
Updated
July 19 2024
Views
8,914

Terminology
External Link
The MEDLINE/PubMed Baseline Repository (MBR) provides access to each MEDLINE/PubMed Baseline snapshot starting with the 2002 MEDLINE Baseline. Each baseline contains a snapshot of MEDLINE citations in the state they were at a given moment in time without the MeSH vocabulary updates and other revisions that occur during the year. The baseline snapshot is created at the beginning of each new MeSH Indexing Year. The records included in the MEDLINE/PubMed Baseline databases represent a static view of the data at the time each baseline database was created.
Tags dataset literature
Updated
July 19 2024
Views
13,328

Literature
Dataset
*A file containing all Min/Max Baseline Reports for 2005-2023 in their original format is available in the Attachments section below. A second file includes a separate set of reports, made available from 2002-2017, that did not include OLDMEDLINE records.*
MEDLINE/PubMed annual statistical reports are based upon the data elements in the baseline versions of MEDLINE®/PubMed are available. For each year covered the reports include: total citations containing each element; total occurrences of each element; minimum/average/maximum occurrences of each element in a record; minimum/average/maximum length of a single element occurrence; average record size; and other statistical data describing the content and size of the elements.
Tags pubmed
API Docs
Updated
September 6 2024
Views
19,707

Literature
Dataset
*A file containing all Misc Baseline Reports for 2018-2023 in their original format is available in the Attachments section below.*
MEDLINE/PubMed annual statistical reports are based upon the data elements in the baseline versions of MEDLINE®/PubMed are available. For each year covered the reports include: total citations containing each element; total occurrences of each element; minimum/average/maximum occurrences of each element in a record; minimum/average/maximum length of a single element occurrence; average record size; and other statistical data describing the content and size of the elements.
Tags pubmed
API Docs
Updated
September 6 2024
Views
19,046

Literature
External Link
PubMed is a free resource supporting the search and retrieval of biomedical and life sciences literature with the aim of improving health–both globally and personally.
The PubMed database contains citations and abstracts of biomedical literature. It does not include full text journal articles; however, links to the full text are often present when available from other sources, such as the publisher's website or PubMed Central (PMC).
See the PubMed User Guide for more information. https://pubmed.ncbi.nlm.nih.gov/help/
Tags api data distribution dataset literature pubmed
Updated
July 19 2024
Views
8,070

Consumer Health
External Link
MedlinePlus is the National Institutes of Health's Web site for patients and their families and friends. Produced by the National Library of Medicine, the world’s largest medical library, it brings you information about diseases, conditions, and wellness issues in language you can understand. MedlinePlus offers reliable, up-to-date health information, anytime, anywhere, for free.
Tags api consumer health dataset multilanguage public health
Updated
July 19 2024
Views
13,475

Images
External Link
MedPix is a database of patient cases integrating images and textual information. The content material is organized by disease location (organ system), pathology category, patient profiles, and by image classification and caption. Additional information at https://medpix.nlm.nih.gov/home
Tags api education images medical imaging training and instruction
Updated
July 19 2024
Views
12,283