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Molecular biology/Genetics
External Link
A computer algorithm that identifies similar protein 3-dimensional structures. Structure neighbors for every structure in MMDB are pre-computed and accessible via links on the MMDB Structure Summary pages.
Tags protein tools & utilities
Updated
July 19 2024
Views
11,177

Molecular biology/Genetics
External Link
This resource provides viral genome sequence data and related information.
Tags dataset genomics virus
Updated
July 19 2024
Views
12,825

Molecular biology/Genetics
External Link
This tool helps identify the genotype of a viral sequence.
Tags dataset genomics tools & utilities virus
Updated
July 19 2024
Views
13,037

Images
External Link
The NLM Visible Human Project® has created publicly-available complete, anatomically detailed, three-dimensional representations of a human male body and a human female body. Specifically, the VHP provides a public-domain library of cross-sectional cryosection, CT, and MRI images obtained from one male cadaver and one female cadaver. The Visible Man data set was publicly released in 1994 and the Visible Woman in 1995.
Tags anatomy data distribution dataset images medical imaging
Updated
July 19 2024
Views
41,093

Molecular biology/Genetics
External Link
Whole Genome Shotgun (WGS) projects are genome assemblies of incomplete genomes or incomplete chromosomes of prokaryotes or eukaryotes that are generally being sequenced by a whole genome shotgun strategy. WGS projects may be annotated, but annotation is not required. NCBI has a Prokaryotic Genomes Annotation Pipeline that may be requested at the time the genome files are submitted to GenBank. This pipeline generates a submission-ready annotated file that is posted back to the submitter for review and which the submitter could edit prior to data release.
The public WGS projects are at the list of WGS projects. https://www.ncbi.nlm.nih.gov/Traces/wgs/
Tags computational biology dataset genomics
Updated
July 19 2024
Views
14,620

Molecular biology/Genetics
External Link
This genetic variation services interconvert and transform short genetic variants between HGVS expressions, VCF format, and the new SPDI (Sequence Position Deletion Insertion) format, based on alignment datasets used by ClinVar and dbSNP. NOTE: This service is still in beta testing mode
Tags api data specifications genetics genomics molecular biology and 1 more
Updated
July 19 2024
Views
259

Molecular biology/Genetics
External Link
Compute cDNA-to-Genomic sequence alignments.
Tags computational biology genomics software tools & utilities
Updated
July 19 2024
Views
6,697

Molecular biology/Genetics
External Link
Three dimensional structures provide a wealth of information on the biological function and the evolutionary history of macromolecules. They can be used to examine sequence-structure-function relationships, interactions, active sites, and more.
Tags computational biology dataset macromolecules protein tools & utilities
Updated
July 19 2024
Views
6,476

Literature
External Link
Information about abstracts with distinct, labeled sections (e.g., Introduction, Methods, Results, discussion) that appear in MEDLINE.
Tags dataset literature
Updated
July 19 2024
Views
6,338

Molecular biology/Genetics
External Link
The Taxonomy Database is a curated classification and nomenclature for all of the organisms in the public sequence databases. This currently represents about 10% of the described species of life on the planet.
Tags biology classification dataset
Updated
July 19 2024
Views
6,637