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Molecular biology/Genetics
External Link
Coffee Break is a resource at NCBI that combines reports on recent biomedical discoveries with use of NCBI tools. The result is an interactive tutorial that tells a biological story. Each report is based on a discovery reported in one or more articles from the recently published peer-reviewed literature. After a brief introduction that sets the work described into a broader context, the report focuses on how a molecular understanding can provide explanations of observed biology and lead to therapies for diseases.
Tags books reference training and instruction
Updated
September 30 2022
Views
2,654

Molecular biology/Genetics
External Link
The Entrez Programming Utilities (E-utilities) are a set of eight server-side programs that provide a stable interface into the Entrez query and database system at the National Center for Biotechnology Information (NCBI). The E-utilities use a fixed URL syntax that translates a standard set of input parameters into the values necessary for various NCBI software components to search for and retrieve the requested data. The E-utilities are therefore the structured interface to the Entrez system, which currently includes 38 databases covering a variety of biomedical data, including nucleotide and protein sequences, gene records, three-dimensional molecular structures, and the biomedical literature. Technical Documentation at http://www.ncbi.nlm.nih.gov/books/NBK25501/
Tags api biomedicine computational biology tools & utilities
Updated
September 30 2022
Views
2,654

Molecular biology/Genetics
External Link
Genetic Relationship and Fingerprinting (GRAF) is a rapid statistical method to detect duplicates and closely related samples in large genomic datasets to be used as a quality assurance tool in dbGaP data processing. For more information, see this abstract in PubMed.
https://www.ncbi.nlm.nih.gov/pubmed/28609482
Tags computational biology genomics software tools & utilities
Updated
September 30 2022
Views
2,651

Molecular biology/Genetics
External Link
This tool helps identify the genotype of a viral sequence.
Tags dataset genomics tools & utilities virus
Updated
September 30 2022
Views
2,649

Molecular biology/Genetics
External Link
A database providing information on the structure of assembled genomes, assembly names and other meta-data, statistical reports, and links to genomic sequence data.
Tags dataset genetics genomics
Updated
September 30 2022
Views
2,647

Molecular biology/Genetics
External Link
dbVar is NCBI's database of human genomic Structural Variation — large variants >50 bp including insertions, deletions, duplications, inversions, mobile elements, translocations, and complex variants.
Tags dataset genetics genomics tools & utilities
Updated
September 30 2022
Views
2,646

Molecular biology/Genetics
External Link
Quickly identifying segments of a nucleic acid sequence that may be of vector origin.
Tags genomics tools & utilities
Updated
September 30 2022
Views
2,644

Molecular biology/Genetics
External Link
Information about known interactions of HIV-1 proteins with proteins from human hosts. It provides annotated bibliographies of published reports of protein interactions, with links to the corresponding PubMed records and sequence data.
Tags dataset virus
Updated
September 30 2022
Views
2,642

Molecular biology/Genetics
External Link
A computer algorithm that identifies similar protein 3-dimensional structures. Structure neighbors for every structure in MMDB are pre-computed and accessible via links on the MMDB Structure Summary pages.
Tags protein tools & utilities
Updated
September 30 2022
Views
2,642

Molecular biology/Genetics
External Link
A free, centralized voluntary registry of comprehensive genetic test information covering clinical and research tests for Mendelian disorders and drug responses including multigenic, array-based, biochemical, cytogenetic, and molecular tests.
Tags genetics genomics tools & utilities
Updated
September 30 2022
Views
2,641