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Molecular biology/Genetics
External Link
The BioProject database provides an organizational framework to access information about research projects with links to data that have been or will be deposited into archival databases maintained at members of the International Nucleotide Sequence Database Consortium (INSDC, which comprises the DNA DataBank of Japan (DDBJ), the European Nucleotide Archive at European Molecular Biology Laboratory (ENA), and GenBank at the National Center for Biotechnology Information (NCBI)).
Tags api computational biology dataset genomics
Updated
September 30 2022
Views
4,604

Molecular biology/Genetics
External Link
This resource provides cytogenetic locations for features or sequence locations, or sequence locations for cytogenetic locations.
Tags cytogenetics genomics tools & utilities
Updated
September 30 2022
Views
4,135

Molecular biology/Genetics
External Link
ClinVar aggregates information about genomic variation and its relationship to human health.
Tags dataset genomics
Updated
September 30 2022
Views
2,369

Molecular biology/Genetics
External Link
The Consensus CDS (CCDS) project is a collaborative effort to identify a core set of human and mouse protein coding regions that are consistently annotated and of high quality. The long term goal is to support convergence towards a standard set of gene annotations.
Available information includes: Announcements, Overview, Access and Availability, Collaborators, CCDS Identifiers and Tracking, Process Flow and Quality Testing, Publications.
Initial results from the Consensus CDS project are now available from the participants' genome browser Web sites. In addition, CCDS identifiers are indicated on the relevant NCBI RefSeq and Entrez Gene records. CCDS reports can be accessed by following provided links, or by directly querying the underlying database using the query interface provided at the top of the home page. The CCDS dataset is also available for anonymous FTP.
Tags dataset genetics genomics protein
Updated
September 30 2022
Views
2,246

Molecular biology/Genetics
External Link
dbVar is NCBI's database of human genomic Structural Variation — large variants >50 bp including insertions, deletions, duplications, inversions, mobile elements, translocations, and complex variants.
Tags dataset genetics genomics tools & utilities
Updated
September 30 2022
Views
2,227

Molecular biology/Genetics
External Link
The database of Genotypes and Phenotypes (dbGaP) was developed to archive and distribute the data and results from studies that have investigated the interaction of genotype and phenotype in Humans.
Tags dataset genetics genomics software tools & utilities
Updated
September 30 2022
Views
2,258

Molecular biology/Genetics
External Link
dbSNP contains human single nucleotide variations, microsatellites, and small-scale insertions and deletions along with publication, population frequency, molecular consequence, and genomic and RefSeq mapping information for both common variations and clinical mutations. dbSNP tutorials can be found at https://github.com/ncbi/dbsnp/tree/master/tutorials
Tags api dataset genetics genomics tools & utilities
Updated
September 30 2022
Views
2,290

Molecular biology/Genetics
External Link
NIH Genetic sequence database, an annotated collection of all publicly available DNA sequences.
Tags genetics genomics
Updated
September 30 2022
Views
2,349

Molecular biology/Genetics
External Link
Gene integrates information from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
Tags api dataset genes genomics phenotype and 1 more
Updated
September 30 2022
Views
2,265

Molecular biology/Genetics
External Link
GEO is a public functional genomics data repository supporting MIAME-compliant data submissions. There are also tools provided to help users query and download experiments and curated gene expression profiles.
Tags dataset genomics tools & utilities
Updated
September 30 2022
Views
2,544