43 Results filtered by...
Filter
Skip to the results
Back
Clear All

Tags > tools & utilities

Sort

Sort by Alphabetical

Filter

Category

View Types

Special Categories

NLM Organization

Tags

Show All...
Tags > tools & utilities Clear All

Drugs and Chemicals
External Link
An interface for building applications that allows users to combine functions of various NLM drug APIs, including the RxNorm, RxClass, RxTerms, and NDF-RT APIs. Sequences of functions can be executed interactively or in batch mode.
Tags api drugs supplements tools & utilities
Updated
July 19 2024
Views
8,138

Drugs and Chemicals
External Link
An application for navigating RxNorm drugs. This applications displays relations among drug entities in RxNorm and provides additional information about RxNorm drugs, including drug classes, pill images and drug-drug interactions. RxNav is supported by several drug APIs.
Tags drugs supplements tools & utilities
Updated
July 19 2024
Views
6,785

Research
External Link
The SKR Project was initiated at NLM in order to develop programs to provide usable semantic representation of biomedical free text by building on resources currently available at the library. The SKR project is concerned with reliable and effective management of the information encoded in natural language texts. The project develops programs that provide usable semantic representation of biomedical text by building on resources currently available at the Library, especially the UMLS knowledge sources and the natural language processing tools provided by the SPECIALIST system. This Java-based API to the Semantic Knowledge Representation (SKR) Scheduler facility was created to provide users with the ability to programmatically submit jobs to the Scheduler Batch and Interactive facilities instead of using the Web-based interface.
Tags api medical informatics terminologies tools & utilities
Updated
July 19 2024
Views
4,900

Molecular biology/Genetics
External Link
The Sequence Read Archive (SRA) stores sequencing data from the next generation of sequencing platforms including Roche 454 GS System®, Illumina Genome Analyzer®, Life Technologies AB SOLiD System®, Helicos Biosciences Heliscope®, Complete Genomics®, and Pacific Biosciences SMRT®.
Tags genetics genomics tools & utilities
Updated
July 19 2024
Views
133

Molecular biology/Genetics
External Link
This site is for browsing WGS (Whole Genome Shotgun) genomes, TSA (Transcriptome Shotgun Assemblies) and TLS (Targeted Locus Study) sets. WGS sequences are incomplete genomes that have been sequenced by a whole genome shotgun strategy. TSA sequences are transcript sequences that have been computationally assembled from primary RNA sequence data. TLS sequences are large-scale marker gene sequencing studies.
Please consult WGS Submission or TSA Submission pages for more details.
https://www.ncbi.nlm.nih.gov/genbank/wgs
https://www.ncbi.nlm.nih.gov/genbank/tsa
Tags genomics tools & utilities
Updated
July 19 2024
Views
318

Molecular biology/Genetics
External Link
This genetic variation services interconvert and transform short genetic variants between HGVS expressions, VCF format, and the new SPDI (Sequence Position Deletion Insertion) format, based on alignment datasets used by ClinVar and dbSNP. NOTE: This service is still in beta testing mode
Tags api data specifications genetics genomics tools & utilities and 1 more
Updated
July 19 2024
Views
175

Molecular biology/Genetics
External Link
Compute cDNA-to-Genomic sequence alignments.
Tags computational biology genomics software tools & utilities
Updated
July 19 2024
Views
6,220

Molecular biology/Genetics
External Link
Three dimensional structures provide a wealth of information on the biological function and the evolutionary history of macromolecules. They can be used to examine sequence-structure-function relationships, interactions, active sites, and more.
Tags computational biology dataset macromolecules protein tools & utilities
Updated
July 19 2024
Views
5,974

Molecular biology/Genetics
External Link
TSA is an archive of computationally assembled transcript sequences from primary data such as ESTs and Next Generation Sequencing Technologies. The overlapping sequence reads from a complete transcriptome are assembled into transcripts by computational methods instead of by traditional cloning and sequencing of cloned cDNAs. The primary sequence data used in the assemblies must have been experimentally determined by the same submitter. TSA sequence records differ from GenBank records because there are no physical counterparts to the assemblies.
Tags dataset genomics tools & utilities
Updated
July 19 2024
Views
1,003

Other
External Link
A JavaScript package that can be included in webpages or programs and used for validating and converting unit expressions from the Unified Code for Units of Measure (UCUM).
Tags health data standards terminologies tools & utilities
Updated
July 19 2024
Views
6,059